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Content Type

First Letter

A (41) | B (10) | C (39) | D (33) | E (25) | F (9) | G (10) | H (6) | I (30) | J (6) | K (3) | L (11) | M (21) | N (15) | O (21) | P (37) | Q (2) | R (26) | S (35) | T (22) | U (7) | V (5) | W (6)

	DeepGOPlus: improved protein function prediction from sequence	Neuro-Symbolic AI, protein function
	DeepGOWeb: fast and accurate protein function prediction on the (Semantic) Web	Ontology engineering, protein function
	DeepGOZero	Neuro-Symbolic AI, protein function
	DeepGOZero: improving protein function prediction from sequence and zero-shot learning based on ontology axioms	Neuro-Symbolic AI, protein function
	DeepMOCCA	Biomedical Informatics, Drug mechanisms, Semantic similarity
	DeepPheno	Neuro-Symbolic AI, protein function
	DeepPheno: Predicting single gene loss-of-function phenotypes using an ontology-aware hierarchical classifier	Neuro-Symbolic AI, Phenotype informatics, Rare disease
	DeepPVP: phenotype-based prioritization of causative variants using deep learning	Neuro-Symbolic AI, Rare disease
	DeepSVP	genomics, Phenotype informatics, Rare disease
	DeepSVP: integration of genotype and phenotype for structural variant prioritization using deep learning	genomics, Rare disease
	DeepViral	genomics, Phenotype informatics, Rare disease
	DeepViral: prediction of novel virus–host interactions from protein sequences and infectious disease phenotypes	Biomedical Informatics, Drug mechanisms
	DELE	Applied Ontology, Neuro-Symbolic AI, Ontology engineering
	DELE: Deductive EL++ Embeddings for Knowledge Base Completion	Applied Ontology, Neuro-Symbolic AI, Ontology engineering
	DermO; an ontology for the description of dermatologic disease	Applied Ontology, Phenotype informatics
	DES-TOMATO: A Knowledge Exploration System Focused On Tomato Species	Applied Ontology, Ontology engineering
	DESM: portal for microbial knowledge exploration systems	Microbial communities, Ontology engineering
	Digital Twin For Wireless Communication	Research
	Discover	Research
	Distributed Systems and Autonomy Research Group	Front Page
	DL2Vec	Applied Ontology, Neuro-Symbolic AI, Ontology engineering
	Drug mechanisms	Drug mechanisms
	DTI-Voodoo: machine learning over interaction networks and ontology-based background knowledge predicts drug interactions	Drug mechanisms, Neuro-Symbolic AI
	Effects of Negation and Uncertainty Stratification on Text-Derived Patient Profile Similarity	Biomedical Informatics, Semantic similarity
	EL Embeddings	Applied Ontology, Neuro-Symbolic AI, Ontology engineering
	EL Embeddings: Geometric construction of models for the Description Logic EL++	Neuro-Symbolic AI
	EL2Box	Applied Ontology, Neuro-Symbolic AI, Ontology engineering
	Electrical and Computer Engineering Program	Front Page
	EmbedPVP	genomics, Phenotype informatics, Rare disease
	EMC10 homozygous variant identified in a family with global developmental delay, mild intellectual disability, and speech delay	genomics, Rare disease
	Energy Conversion Devices and Materials Laboratory Research Group	Front Page
	Enhancing Geometric Ontology Embeddings for ^++ with Negative Sampling and Deductive Closure Filtering	Neuro-Symbolic AI
	Enriched biodiversity data as a resource and service	Applied Ontology, Biomedical Informatics
	Environmental Statistics Research Group	Front Page
	Evaluating Different Methods for Semantic Reasoning Over Ontologies	Ontology engineering
	Evaluating gold standard corpora against gene/protein tagging solutions and lexical resources	Biomedical Informatics
	Evaluating semantic similarity methods for comparison of text-derived phenotype profiles	Semantic similarity
	Evaluating the effect of annotation size on measures of semantic similarity	Applied Ontology, Semantic similarity
	Evaluation and Cross-Comparison of Lexical Entities of Biological Interest (LexEBI)	Applied Ontology, Biomedical Informatics
	Evaluation of research in biomedical ontologies	Applied Ontology, Biomedical Informatics
	Experiences with Aber-OWL, an Ontology Repository with OWL EL Reasoning	Ontology engineering
	Exploring Gene Ontology Annotations with OWL	Applied Ontology, protein function
	Exploring the Use of Ontology Components for Distantly-Supervised Disease and Phenotype Named Entity Recognition	Applied Ontology
	Extensions of Dynamic Programming, Machine Learning, Discrete Optimization Research Group	Front Page
	Extreme Bandwidth Communication	Front Page
	Extreme Computing Research Center	Front Page
	Extreme Events and Risk Analysis	Research
	Extreme Statistics Research Group	Front Page
	FALDO: a semantic standard for describing the location of nucleotide and protein feature annotation	Applied Ontology, Ontology engineering
	Flow Simulation at the Exascale	Front Page
	FoodOn: a harmonized food ontology to increase global food traceability, quality control and data integration	Applied Ontology, Ontology engineering
	Formal axioms in biomedical ontologies improve analysis and interpretation of associated data	Applied Ontology, Ontology engineering
	Francesco Orabona Research Group	Front Page
	Free Boundary and Interface Problems Research Group	free boundary problems, geometric properties, weak solutions behavior, Front Page
	From Axioms over Graphs to Vectors, and Back Again: Evaluating the Properties of Graph-based Ontology Embeddings	Neuro-Symbolic AI
	Front Page
	Fully Geometric Multi-hop Reasoning on Knowledge Graphs with Transitive Relations	Applied Ontology, Neuro-Symbolic AI, Ontology engineering
	GenomeLinter	genomics, Phenotype informatics, Rare disease
	Genomic Context	Neuro-Symbolic AI, protein function
	Genomic diversity and antimicrobial resistance of Staphylococcus aureus in Saudi Arabia: a nationwide study using whole-genome sequencing	Biomedical Informatics, genomics
	Genomic landscape in Saudi patients with hepatocellular carcinoma using whole-genome sequencing: a pilot study	Biomedical Informatics, genomics
	Genomic landscape of retinoblastoma: Insights into risk stratification and precision pediatric Neuro-Oncology	genomics, Rare disease
	Genomics	genomics
	Geospatial Statistics and Health Surveillance Research Group	Front Page
	GFVO: the Genomic Feature and Variation Ontology	Applied Ontology, genomics
	GO-Agent	Neuro-Symbolic AI, protein function
	Graduate Student Milestones and Guidelines	Study
	Health and Environmental Applications	Research
	Hierarchical Computations on Manycore Architectures Research Group	high-intensity computations, matrix-free methods, optimal algorithms, Front Page
	Higgs bosons, mars missions, and unicorn delusions: How to deal with terms of dubious reference in scientific ontologies	Applied Ontology
	High Performance Visualization Research Group	Front Page
	High-Performance Computing and Big Data	Research
	Hyaline Arteriolosclerosis in 30 Strains of Aged Inbred Mice	Biomedical Informatics, Phenotype informatics
	I2S Projects
	Identifying aberrant pathways through integrated analysis of knowledge in pharmacogenomics	Biomedical Informatics, Drug mechanisms
	IEEE Antennas and Propagation Society (AP-S) Student Branch Chapter at King Abdullah University of Science and Technology (KAUST)	Resources
	Image and Video Understanding Lab
	Image and Video Understanding Lab Research Group	Front Page
	Improved characterisation of clinical text through ontology-based vocabulary expansion	Biomedical Informatics, Phenotype informatics
	Improving the classification of cardinality phenotypes using collections	Applied Ontology
	In silico exploration of Red Sea Bacillus genomes for natural product biosynthetic gene clusters	Microbial communities
	In silico screening for candidate chassis strains of free fatty acid-producing cyanobacteria	Microbial communities
	INDIGENA	genomics, Phenotype informatics, Rare disease
	InfoCloud Research Group	Front Page
	Information Science Lab Research Group	Front Page
	Innovate	Research
	Integrated Intelligent Systems (I2S) Lab	Front Page
	Integrated Microwave Packaging Antennas and Circuits Technology Research Group
	Integrated Photonics Lab Journal Covers	Research
	Integrated Photonics Lab Media Gallery	Media
	Integrated Photonics Lab Research Areas	Research
	Integrated Photonics Lab Research Facilities	Research
	Integrated Photonics Lab Research Group	Front Page
	Integrated Telecommunication and Sensing Systems	Front Page
	Integrating phenotype ontologies with PhenomeNET	Phenotype informatics, Rare disease
	Integration of knowledge for personalized medicine: a pharmacogenomics case-study	Drug mechanisms, Ontology engineering
	Interactively Exploring Graph Coloring Algorithms in a Bilingual Web Platform with Gamification
	Internet of Things, Cyber-Physical Systems and Smart Cities	Research
	Internship Opportunities	Opportunities
	Interoperability between biomedical ontologies through relation expansion, upper-level ontologies and automatic reasoning	Applied Ontology, Ontology engineering